set of DNA invariants and their use in alignment-free sequence comparison in a N-dimensional space and construction of phylogenetic tress is also reviewed....
included in suborder Strepsirrhini based on construction of phylogenetic tress used Neighbor-Joining method based on nucleotide sequence and amino acid ...
included in suborder Strepsirrhini based on construction of phylogenetic tress used Neighbor-Joining method based on nucleotide sequence and amino acid ...
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as maximum parsimony (MP) and maximum likelihood (ML). Conventional ...
Our study suggests that phenological patterns of the Bombacaceae family in Neotropical dry forests are mainly constrained by phylogenetic membership and ...
(as the control) were squenced by DNA sequencing technique,and the phylogenetic tress of the chicken breeds were constructed.The results showed that 24 ...
We suggest a novel distance-based method for the determination of phylogenetic trees. It is based on multidimensional scaling and Euclidean Steiner trees i...
The phylogenetic conservation of the immunologically active CD91 ligands, alpha2M and hsps, is consistent with the idea of an ancestral system of immune ...
Specifically, we: (a) analyzed the effect of environmental heterogeneity on species, functional and phylogenetic diversity within microsites (alpha diversity, ...
BLAST is a commonly-used software package for comparing a query sequence to a database of known sequences; in this study, we focus on protein sequences. Position-specific-iterated BLAST (PSI-BLAST) iteratively searches a protein sequence...
The BLAST programs are widely used tools for searching protein and DNA databases for sequence similarities. For protein comparisons, a variety of definitional, algorithmic and statistical refinements described here pe...
A new method called the neighbor-joining method is proposed for reconstructing phylogenetic trees from evolutionary distance data. The principle of this me...
A new method called the neighbor-joining method is proposed for reconstructing phylogenetic trees from evolutionary distance data. The principle of this me...
A package of programs (run by a management program called TREECON) was developed for the construction and drawing of evolutionary trees. The program MATRIX...
Small subunit rRNA sequences have been determined for 10 of the most clinically important pathogenic species of the yeast genus Candida (including Torulops...
The accuracies and efficiencies of four different methods for constructing phylogenetic trees from molecular data were examined by using computer simulatio...
A progressive alignment method is described that utilizes the Needleman and Wunsch pairwise alignment algorithm iteratively to achieve the multiple alignme...
Polymerase chain reaction conditions were established for the in vitro amplification of eukaryotic small subunit ribosomal (16S-like) rRNA genes. Coding re...
We cloned and sequenced a segment of mitochondrial DNA from human, chimpanzee, gorilla, orangutan, and gibbon. This segment is 896 bp in length, contains t...
